Characterization of cultivated and wild species of Capsicum using microsatellite markers
Downloads
Published
DOI:
https://doi.org/10.5958/0974-0112.2018.00039.7Keywords:
Chilli, genetic diversity, hot pepper, DNA markers, simple sequence repeatsIssue
Section
License
Copyright (c) 2018 Indian J. Hortic.
This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License.
Abstract
Diversity of twenty four genotypes of hot pepper representing cultivated species Capsicum annuum, C. frutescens, C. baccatum and C. chinense as well as a wild species C. chacoense was analyzed in the present study using 99 microsatellite loci distributed uniformly throughout the genome. The 85 polymorphic loci, out of 99 simple sequence repeat (SSR) loci used, amplified a total of 192 alleles among the 24 genotypes with one to five allele per loci. The average number of alleles per loci was found to be 2.25. The highest polymorphism information content (PIC value) was observed to be 0.729 for the marker located on linkage group 6. Principal component analysis provided useful information regarding genetic relationship among genotypes as it distributed all the genotypes studied into three major groups each including different species. All the C. annuum genotypes were grouped together while other cultivated species formed a separate group. The C. chacoenese was the only wild species studied which, although, fell within the first group but was placed separately from C. annuum. Besides, all the Chilli leaf curl resistant genotypes were grouped together.
How to Cite
Downloads
Similar Articles
- G. Ashok Kumar, A. Jayajasmine, S.T. Bini Sundar, K. Elayaraja, S. Vasanth, Ex-situ evaluation of genetic diversity in indigenous Nerium accessions , Indian Journal of Horticulture: Vol. 81 No. 01 (2024): Indian Journal of Horticulture
- Anurag Kashyap, D.P. Deshmukh, S. Acharjee, K.K. Biswas, Prevalence of Citrus tristeza virus in North Eastern region of India and molecular characterization of its isolates , Indian Journal of Horticulture: Vol. 72 No. 02 (2015): Indian Journal of Horticulture
- S. Pinnamwar, A.S. Dhatt, Combining ability studies for yield, quality and storage in onion , Indian Journal of Horticulture: Vol. 74 No. 01 (2017): Indian Journal of Horticulture
- S.K. Dutta, Amrita Banerjee, R.S. Akoijam, Saurav Saha, Lungmuana ., Y. Ramakrishna, T. Boopathi, Somnath Roy, Vishambhar Dayal, Collection and phenotypic characterisation of pole-type common bean (Phaseolus vulgaris L.) landraces from Mizoram , Indian Journal of Horticulture: Vol. 75 No. 01 (2018): Indian Journal of Horticulture
- Amar Jeet Gupta, Ashwini P.Benke, V Mahajan, Major Singh, Evaluation of genetic diversity and development of core collection of onion , Indian Journal of Horticulture: Vol. 78 No. 01 (2021): Indian Journal of Horticulture
- Ravindra Mulge, Praveen Mahendrakar, S.J. Prashanth, Prediction of heterosis based on genetic divergence in tomato , Indian Journal of Horticulture: Vol. 69 No. 04 (2012): Indian Journal of Horticulture
- Deepa Samant, Kundan Kishore, Standardization of pruning for high density Sardar guava orchards under hot and humid climate of Eastern India , Indian Journal of Horticulture: Vol. 76 No. 01 (2019): Indian Journal of Horticulture
- Deepa Sharma, H.R. Sharma, Production and evaluation of tomato hybrids using diallel genetic design , Indian Journal of Horticulture: Vol. 70 No. 04 (2013): Indian Journal of Horticulture
- A.A. Murkute, Brajesh Singh, Jai Gopal, Residue analysis and bulb sprouting in CIPC treated onion , Indian Journal of Horticulture: Vol. 70 No. 04 (2013): Indian Journal of Horticulture
- Narayan Lal, Awtar Singh, S.K. Singh, Abhay Kumar, S.D. Pandey, Vishal Nath, Morphological diversity in litchi based on phenological traits , Indian Journal of Horticulture: Vol. 80 No. 1 (2023): Indian Journal of Horticulture
<< < 25 26 27 28 29 30 31 32 33 34 > >>
You may also start an advanced similarity search for this article.
Most read articles by the same author(s)
- Aruna T.S, Arpita Srivastava, Bhoopal Singh Tomar, Anil Khar, Harikrishna Yadav, P.K. Jain, Renu Pandey, Shubham Singh, T.K. Behera, Manisha Mangal, Insights from morpho-physio-biochemical and molecular traits of hot pepper genotypes contrasting for heat tolerance , Indian Journal of Horticulture: Vol. 81 No. 01 (2024): Indian Journal of Horticulture
- P. Muthukumar, Pritam Kalia, Munish Sharma, Sonia Vashisht, Study of β-carotene enhancing ‘Or’ gene effects on yield and contributing traits in mid-season Indian cauliflower (Brassica oleracea var. botrytis L.) , Indian Journal of Horticulture: Vol. 74 No. 04 (2017): Indian Journal of Horticulture
- Shrawan Singh, Selvakumar R, Manisha Mangal, Pritam Kalia, Breeding and genomic investigations for quality and nutraceutical traits in vegetable crops-a review , Indian Journal of Horticulture: Vol. 77 No. 01 (2020): Indian Journal of Horticulture
- Arpita Srivastava, Vinukonda Rakesh Sharma, Madhusmita Dishri, Archana Dikshit, Manisha Mangal, Pritam Kalia, Inheritance of fruit attributes in chilli pepper , Indian Journal of Horticulture: Vol. 76 No. 01 (2019): Indian Journal of Horticulture
- R. Selvakumar, Pritam Kalia, R.S. Raje, Genetic analysis of root yield and its contributing traits in tropical carrot (Daucus carota L.) , Indian Journal of Horticulture: Vol. 74 No. 02 (2017): Indian Journal of Horticulture
- S.S Dey, Reeta Bhatia, Chander Parkash, Pritam Kalia, R.N Barwal, Evaluation of cauliflower (Brassica oleracea var. botrytis) CMS (Ogura) lines for agronomic and floral traits , Indian Journal of Horticulture: Vol. 71 No. 03 (2014): Indian Journal of Horticulture
- V.R. Sagar, Pritam Kalia, Evaluation of temperate carrot genotypes for quality attributes , Indian Journal of Horticulture: Vol. 72 No. 01 (2015): Indian Journal of Horticulture
- Shrawan Singh, Pritam Kalia, Manisha Mangal, Hadassah Chinthagunti, Chetna Chug, Sheshnath Mishra, Shivakumara T.N, Uma Rao, In Vitro screening technique and polymorphic DNA markers for introgression of root knot nematode resistance in tropical carrot , Indian Journal of Horticulture: Vol. 76 No. 03 (2019): Indian Journal of Horticulture
- Swati Saha, Pritam Kalia, A.K. Sureja, Preeti Singhal, S. Sarkar, Evaluation of European carrot genotypes for their nutritive characters , Indian Journal of Horticulture: Vol. 72 No. 04 (2015): Indian Journal of Horticulture
- Sabina Islam, Neelam Patel, Anil Khar, Arpita Srivastava, Pritam Kalia, Yogesh Khade, Variation in various antioxidant biochemicals and morphological traits in kharif onion , Indian Journal of Horticulture: Vol. 74 No. 01 (2017): Indian Journal of Horticulture